STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW2417Conserved hypothetical protein; Predicted membrane protein. (164 aa)    
Predicted Functional Partners:
SYNW1510
Conserved hypothetical protein.
   
    0.751
SYNW2418
MazG family protein.
       0.708
SYNW2061
Conserved hypothetical protein.
  
     0.565
SYNW2054
Conserved hypothetical protein.
  
     0.538
SYNW1260
Conserved hypothetical protein.
  
     0.487
SYNW0302
Conserved hypothetical protein.
  
     0.478
SYNW1251
Conserved hypothetical protein.
  
     0.470
glgX
Possible glycogen operon protein GlgX; Probable pseudogene. N terminus end of a glgX gene which is frameshifted.
  
     0.469
SYNW1111
Conserved hypothetical protein.
  
     0.465
SYNW0139
Conserved hypothetical protein.
  
     0.460
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.