STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW2479ABC transporter component, possibly Zn transport. (276 aa)    
Predicted Functional Partners:
SYNW2480
ABC transporter,ATP binding component, possibly zinc transport.
 
 0.999
SYNW2481
Putative zinc transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
 0.994
SYNW1341
ABC transporter, substrate binding protein, possibly Mn; Belongs to the bacterial solute-binding protein 9 family.
  
 0.868
SYNW1340
ABC transporter, ATP binding domain, possibly Mn transporter.
 
 
 0.866
SYNW0970
ABC transporter, ATP binding domain, possibly Mn transport.
 
 
 0.859
SYNW0969
ABC transporter component, possibly Mn transport.
  
  
  0.845
SYNW0971
ABC transporter, substrate binding protein, possibly Mn; Belongs to the bacterial solute-binding protein 9 family.
 
  
 0.840
rpl17,
50S ribosomal protein L17.
      
 0.629
SYNW0126
Two-component response regulator.
      
 0.627
ftsH2
Cell division protein FtsH2; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
      
 0.564
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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