STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cynSCyanate lyase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family. (147 aa)    
Predicted Functional Partners:
SYNW2467
Carbonic anhydrase.
  
 
 0.934
SYNW2491
Hypothetical.
       0.773
nirA
Ferredoxin--nitrite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
     
 0.719
SYNW2487
Putative cyanate ABC transporter.
 
   
 0.710
SYNW2492
Glutamine amidotransferase-phosphoribosyl anthranilate transferase; Conserved hypothetical assignment similar to trpD, but poor e-value.
     
 0.567
SYNW2486
Putative cyanate ABC transporter.
 
   
 0.510
amt1
Ammonium transporter family.
      
 0.424
glsF,
Ferredoxin-dependent glutamate synthase, Fd-GOGAT.
     
 0.407
ntcA
Global nitrogen regulatory protein, CRP family of transcriptional regulators.
      
 0.406
glnA
Glutamine synthetase, glutamate--ammonia ligase.
      
 0.403
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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