STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW2497Conserved hypothetical protein; Predicted membrane protein. (216 aa)    
Predicted Functional Partners:
SYNW2496
Type II alternative RNA polymerase sigma factor, sigma-70 family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
       0.769
SYNW0623
Conserved hypothetical protein.
  
     0.646
atp1,
Possible ATP synthase protein 1.
  
     0.645
SYNW0903
Conserved hypothetical protein; Predicted membrane protein.
  
     0.623
SYNW0776
Conserved hypothetical protein.
  
 
   0.592
SYNW1804
Conserved hypothetical protein.
  
     0.577
SYNW1777
Conserved hypothetical protein.
  
     0.560
SYNW1260
Conserved hypothetical protein.
  
     0.542
SYNW1111
Conserved hypothetical protein.
  
     0.495
SYNW0302
Conserved hypothetical protein.
  
     0.484
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.