STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL17RAVoltage-dependent L-type calcium channel subunit alpha-1C. (3148 aa)    
Predicted Functional Partners:
UY3_17563
Voltage-dependent L-type calcium channel subunit alpha-1C.
 
   
  0.933
CACNA1C
Voltage-dependent L-type calcium channel subunit alpha-1C.
 
    
0.906
UY3_08837
Interleukin-17F.
     
  0.900
UY3_08957
Voltage-dependent calcium channel subunit alpha-2/delta-2.
   
 0.876
UNC79
Protein unc-79 like protein.
   
 0.842
UY3_10813
Protein unc-79 like protein.
   
 0.842
CACNG1
Voltage-dependent calcium channel gamma-1 subunit; Regulatory subunit of the voltage-gated calcium channel that gives rise to L-type calcium currents in skeletal muscle. Regulates channel inactivation kinetics.
   
 0.808
CACNB4
Voltage-dependent L-type calcium channel subunit beta-4.
   
 0.790
UY3_11656
Voltage-dependent L-type calcium channel subunit beta-3.
   
 0.776
CACNB2
Voltage-dependent L-type calcium channel subunit beta-2.
   
 0.776
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.