STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MSRB3Methionine-R-sulfoxide reductase B3. (64 aa)    
Predicted Functional Partners:
UY3_11793
Mitochondrial peptide methionine sulfoxide reductase.
  
 
 0.824
NME8
Thioredoxin domain-containing protein 3.
  
 0.720
UY3_14815
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. Belongs to the catalase family.
   
  
 0.632
TXNDC11
Thioredoxin domain-containing protein 11.
   
 0.605
CLPX
ATP-dependent Clp protease ATP-binding subunit clpX-like protein.
  
 
 0.523
UY3_16551
DnaJ like protein subfamily C member 10.
   
 0.518
UY3_08445
Protein cereblon.
      
 0.512
UY3_09851
Endothelial PAS domain-containing protein 1.
      
 0.487
SELENOT
Selenoprotein T; Belongs to the SelWTH family. Selenoprotein T subfamily.
      
 0.482
UY3_03927
GrpE protein like protein 1.
   
 
 0.478
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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