STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KDM5ALysine-specific demethylase 5A. (1677 aa)    
Predicted Functional Partners:
TAF3
ATP synthase subunit gamma.
  
 0.905
ATP5A1
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
 0.905
UY3_13929
ATP synthase subunit delta.
  
 0.848
UY3_00387
ATP synthase subunit delta.
  
 0.848
UY3_11973
ATP synthase subunit d.
   
 0.845
ATP5F1
ATP synthase subunit b.
   
 0.833
UY3_06777
Mortality factor 4-like protein 1.
    
 
 0.801
UY3_13529
ATP synthase subunit epsilon.
    
 0.794
UY3_12645
ATP synthase lipid-binding protein; Belongs to the ATPase C chain family.
  
 0.781
ATP5G1
ATP synthase lipid-binding protein; Belongs to the ATPase C chain family.
  
 0.781
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.