STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_11405Heat shock factor 2-binding protein. (277 aa)    
Predicted Functional Partners:
UY3_12831
Breast cancer type 2 susceptibility protein.
    
 
 0.775
PALB2
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
 
 0.497
UY3_10152
Replication protein A 14 kDa subunit.
      
 0.497
TMEM183A
Uncharacterized protein.
      
 0.493
UY3_05556
Synaptonemal complex central element protein 2.
      
 0.489
LRRC42
Leucine-rich repeat-containing protein 42.
      
 0.479
UY3_04161
Nogo-B receptor.
      
 0.468
UY3_15551
Putative ATP-dependent DNA helicase HFM1.
      
 0.435
UY3_13565
Fanconi anemia group M protein.
      
 0.430
UY3_02252
Homologous-pairing protein 2 like protein.
      
 0.418
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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