STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_11246Ras-related protein Rab-18. (224 aa)    
Predicted Functional Partners:
UY3_11679
Rab3 GTPase-activating protein non-catalytic subunit.
     
 0.749
GDI2
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
   
 0.693
UY3_12278
Geranylgeranyl transferase type-2 subunit alpha.
    
 0.589
DCTN6
Dynactin subunit 6.
     
 0.588
UY3_17900
F-actin-capping protein subunit alpha; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
   
 
 0.587
UY3_09377
Ras-related protein Rab-6A.
   
 
0.582
RAB36
Ras-related protein Rab-36.
  
 
0.553
RAB34
Ras-related protein Rab-34.
  
 
0.545
UY3_12448
Protein prenyltransferase alpha subunit repeat-containing protein 1.
    
 0.522
RAB9B
Ras-related protein Rab-9B.
  
 
 
0.507
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
Server load: low (30%) [HD]