STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_11251Armadillo repeat-containing protein 4. (468 aa)    
Predicted Functional Partners:
UY3_11250
Armadillo repeat-containing protein 4.
 
      0.900
TTC25
Tetratricopeptide repeat protein 25.
   
 
 0.671
UY3_07538
EF-hand calcium-binding domain-containing protein 1.
   
 
 0.619
DNALI1
Axonemal dynein light intermediate polypeptide 1.
   
 
 0.568
CCDC114
Uncharacterized protein.
   
 
 0.562
CCDC63
Coiled-coil domain-containing protein 63.
   
 
 0.562
PACRG
Parkin coregulated gene protein.
   
 
 0.555
WDR90
WD repeat-containing protein 90.
    
   0.528
TEKT2
Tektin-2.
   
 
 0.524
CCDC65
Coiled-coil domain-containing protein 65.
   
 
 0.501
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.