STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FBXW4F-box/WD repeat-containing protein 4. (95 aa)    
Predicted Functional Partners:
CUL1
Cullin-1; Belongs to the cullin family.
    
 0.772
UY3_05512
Cullin-3; Belongs to the cullin family.
    
  0.634
WBP1L
Outcome predictor in acute leukemia 1 like protein.
      
 0.622
CALHM2
Calcium homeostasis modulator protein 2.
      
 0.620
NT5C2
Cytosolic purine 5'-nucleotidase.
      
 0.617
CACUL1
Cullin domain-containing protein; Belongs to the cullin family.
    
  0.559
UY3_15773
Thioredoxin domain-containing protein 9.
    
   0.530
CCT5
T-complex protein 1 subunit epsilon.
    
 0.517
UY3_00887
RING-box protein 1.
     
 0.486
POLL
DNA polymerase lambda; Belongs to the DNA polymerase type-X family.
      
 0.483
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.