STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKEF1Ankyrin repeat domain-containing protein 5. (781 aa)    
Predicted Functional Partners:
RNF4
E3 ubiquitin ligase RNF4.
   
  0.548
UY3_16037
Translin-associated factor X-interacting protein 1.
   
  0.544
TEKT3
Tektin-3.
   
   0.538
CCDC65
Coiled-coil domain-containing protein 65.
   
    0.512
RSPH14
Rhabdoid tumor deletion region protein 1.
   
   0.469
UY3_08717
Rhabdoid tumor deletion region protein 1.
   
   0.469
GAK
Cyclin-G-associated kinase.
    
 0.466
UY3_14828
Clathrin_bdg domain-containing protein.
      
 0.441
WDR90
WD repeat-containing protein 90.
    
 0.413
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.