STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_13345DNA mismatch repair protein Msh3. (870 aa)    
Predicted Functional Partners:
UY3_19060
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
0.994
MSH6
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
 
 
0.952
UY3_04609
DNA mismatch repair protein Mlh1.
 
 0.944
UY3_16671
PMS1 protein like protein 1.
 
 0.932
UY3_07872
Radial spoke head 10 like protein B.
 
 0.932
UY3_12361
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.920
UY3_12125
DNA mismatch repair protein Mlh3.
  
 0.898
UY3_13565
Fanconi anemia group M protein.
    
 
 0.892
SNX8
Sorting nexin-8.
    
   0.880
UY3_10830
Flap endonuclease 1.
   
 0.828
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.