STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_16437Prohibitin-2. (410 aa)    
Predicted Functional Partners:
PHB
Prohibitin.
  
0.998
PMPCB
Mitochondrial-processing peptidase subunit beta; Belongs to the peptidase M16 family.
  
 0.909
C1QBP
Complement component 1 Q subcomponent-binding protein.
   
 0.899
UY3_06607
Paraplegin.
   
 0.870
UY3_18900
Elongation factor Tu.
   
 
 0.813
UY3_07874
Calcium uptake protein 1.
    
 0.809
UY3_15139
AFG3-like protein 2.
   
 0.802
UY3_09422
AFG3-like protein 2; Belongs to the AAA ATPase family.
   
 0.802
DEF8
AFG3-like protein 1.
   
 0.802
UY3_05837
ATP-dependent zinc metalloprotease YME1L1; Belongs to the AAA ATPase family.
   
 0.789
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.