STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_10987Uncharacterized protein. (1900 aa)    
Predicted Functional Partners:
UY3_12606
Nipped-B protein.
   
  0.618
UY3_02508
U2 snRNP-associated SURP motif-containing protein.
   
    0.611
UY3_04194
Sentrin-specific protease 6.
   
   0.545
UY3_15650
AT-rich interactive domain-containing protein 4B.
   
 0.496
SF3B1
Splicing factor 3B subunit 1.
   
    0.495
PPARG
Peroxisome proliferator-activated receptor gamma; Nuclear receptor that binds peroxisome proliferators such as hypolipidemic drugs and fatty acids. Once activated by a ligand, the nuclear receptor binds to DNA specific PPAR response elements (PPRE) and modulates the transcription of its target genes, such as acyl-CoA oxidase. It therefore controls the peroxisomal beta-oxidation pathway of fatty acids. Key regulator of adipocyte differentiation and glucose homeostasis. ARF6 acts as a key regulator of the tissue-specific adipocyte P2 (aP2) enhancer. Acts as a critical regulator of gut ho [...]
    
 0.466
PSMA3
Proteasome endopeptidase complex; Belongs to the peptidase T1A family.
   
 0.465
UY3_02296
Zinc finger C3H1 domain-containing protein.
   
   0.459
UY3_05387
Bcl-2-associated transcription factor 1.
   
 0.456
UY3_11167
YTH domain-containing protein 1.
   
 
 0.439
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.