STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_11436Ankyrin repeat family A protein 2. (420 aa)    
Predicted Functional Partners:
LRP4
Low-density lipoprotein receptor-related protein 4.
    
 0.689
UY3_04011
Low-density lipoprotein receptor-related protein 2.
    
 0.689
UY3_17628
Regulatory factor X-associated protein.
    
 
 0.648
ZDHHC13
Palmitoyltransferase ZDHHC13.
  
 
 
 0.540
CDKN2C
Cyclin-dependent kinase 4 inhibitor C.
  
     0.513
NFKBIE
NF-kappa-B inhibitor epsilon.
  
     0.511
UY3_16606
Ankyrin repeat and SOCS box protein 10.
  
     0.508
ASB15
Ankyrin repeat and SOCS box protein 15.
  
     0.506
UY3_18878
Ankyrin repeat domain-containing protein 24.
  
     0.505
UY3_11451
Ankyrin repeat and death domain-containing protein 1B.
  
    0.447
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.