STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGBL4Cytosolic carboxypeptidase 6. (106 aa)    
Predicted Functional Partners:
UY3_09251
BEN domain-containing protein 5.
 
   
 0.889
MACROD2
Uncharacterized protein.
      
 0.605
GRID1
Glutamate receptor delta-1 subunit.
      
 0.569
TTLL4
Tubulin polyglutamylase TTLL4.
    
 
 0.565
CNTNAP2
Contactin-associated protein-like 2.
      
 0.564
UY3_04352
Apoptosis facilitator Bcl-2-like protein 14.
      
 0.514
UY3_12113
Tubulin polyglutamylase TTLL5.
      
 0.489
UY3_17106
Zinc finger protein ubi-d4.
      
 0.432
UY3_03158
Zinc finger protein DPF3.
      
 0.432
CTNND2
Catenin delta-2.
      
 0.406
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.