STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_09047Uncharacterized protein. (186 aa)    
Predicted Functional Partners:
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.685
UY3_11253
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.685
RAG2
V(D)J recombination-activating protein 2.
   
 0.627
BARD1
BRCA1-associated RING domain protein 1.
    
 0.622
RPL21
60S ribosomal protein L21.
   
   0.622
BABAM1
BRISC and BRCA1-A complex member 1.
    
 0.619
UY3_08606
Intersectin-2.
     
 0.602
UY3_15224
Olfactory receptor 5A1; Belongs to the G-protein coupled receptor 1 family.
   
 
 0.557
UY3_11428
60S ribosomal protein L8.
   
 
 0.547
UY3_08610
60S ribosomal protein L13a.
   
   0.497
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.