STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SacsinSacsin. (2151 aa)    
Predicted Functional Partners:
UY3_04010
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 0.714
DIABLO
Diablo like protein.
    
 0.704
UY3_15980
Apoptotic protease-activating factor 1.
   
 0.651
INCENP
Inner centromere protein.
   
 0.632
UY3_10837
Inner centromere protein.
   
 0.632
UBE3A
Ubiquitin-protein ligase E3A; E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and transfers it to its substrates.
   
 
 0.628
UY3_06995
Ubiquitin-conjugating enzyme E2 variant 1.
    
 0.624
UY3_13191
Serine/threonine-protein kinase 12.
   
 0.591
UY3_07023
Serine/threonine-protein kinase 6; Belongs to the protein kinase superfamily.
   
 0.591
PRELID3B
Serine/threonine-protein kinase 12-A.
   
 0.591
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.