STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_17429KRR1 small subunit processome component like protein. (159 aa)    
Predicted Functional Partners:
UTP11
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
 0.981
RPS18
WD repeat-containing protein 46.
   
 0.980
UY3_09822
U3 small nucleolar RNA-associated protein 18 like protein.
   
 0.980
NOP14
Nucleolar protein 14.
   
 0.980
UTP3
Something about silencing protein 10.
   
 0.978
TAF5
Protein RRP5 like protein.
   
 0.977
UY3_16053
Small subunit processome component 20 like protein.
   
 0.974
UTP14A
U3 small nucleolar RNA-associated protein 14 like protein A.
   
 0.972
UTP4
Cirhin.
   
 0.972
EMG1
Ribosomal RNA small subunit methyltransferase NEP1.
  
 0.969
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.