STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZDHHC24Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (287 aa)    
Predicted Functional Partners:
GRINA
Glutamate [NMDA] receptor-associated protein 1.
      
 0.591
ZNF462
Uncharacterized protein.
    
 0.536
UY3_13214
UPF0368 protein Cxorf26.
      
 0.487
PPT1
Palmitoyl-protein thioesterase 1.
      
 0.483
UY3_15264
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
0.467
ZDHHC11B
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.467
UY3_09899
Werner syndrome ATP-dependent helicase.
    
 0.464
UY3_03216
Exonuclease 3'-5' domain-containing protein 1.
      
 0.463
UY3_03766
Putative palmitoyltransferase ZDHHC6.
   
 
 0.451
EGR1
Early growth response protein; Transcriptional regulator. Recognizes and binds to the DNA sequence 5'-GCG(T/G)GGGCG-3'(EGR-site) in the promoter region of target genes. Binds double-stranded target DNA, irrespective of the cytosine methylation status. Regulates the transcription of numerous target genes, and thereby plays an important role in regulating the response to growth factors, DNA damage, and ischemia. Plays a role in the regulation of cell survival, proliferation and cell death. Belongs to the EGR C2H2-type zinc-finger protein family.
    
 0.444
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.