STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SALL1Sal-like protein 1. (1284 aa)    
Predicted Functional Partners:
UY3_03854
Homeobox protein NANOG.
   
 0.639
RBBP7
Histone-binding protein RBBP7.
    
  0.594
RBBP4
Histone-binding protein RBBP4.
    
  0.594
Glypican-3
Glypican-5; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
      
 0.573
GATAD2B
Transcriptional repressor p66-beta.
    
 0.541
TMEM119
Uncharacterized protein.
      
 0.536
UY3_18745
Transcriptional repressor p66-alpha.
    
 0.517
UY3_17460
WD repeat-containing protein 73.
    
 0.491
RBM34
AT-rich interactive domain-containing protein 4B.
      
 0.457
UY3_15650
AT-rich interactive domain-containing protein 4B.
      
 0.457
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.