STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SREK1Splicing regulatory glutamine/lysine-rich protein 1. (677 aa)    
Predicted Functional Partners:
SRSF7
Serine/arginine-rich splicing factor 7.
   
 0.768
UY3_19208
Serine/arginine-rich splicing factor 2.
   
 0.755
CLIC4
Chloride intracellular channel protein; Belongs to the chloride channel CLIC family.
   
 0.732
UY3_02058
RNA-binding protein with serine-rich domain 1.
   
 0.705
SRSF9
Serine/arginine-rich splicing factor 9.
   
 0.700
SRSF1
Serine/arginine-rich splicing factor 1.
   
 0.698
UY3_05165
Tumor protein p63-regulated gene 1 protein.
   
 0.685
UY3_13380
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.676
UY3_12292
Polyadenylate-binding protein 2.
   
 0.666
UY3_14855
Fatty acid-binding protein, liver.
   
 0.665
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.