STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_06017Exosome complex exonuclease RRP44. (678 aa)    
Predicted Functional Partners:
EXOSC1
Exosome complex component CSL4.
   
 0.979
UY3_08253
Exosome complex component RRP4.
   
 0.975
UY3_02709
Exosome complex component RRP41.
   
 0.971
UY3_06016
Exosome complex exonuclease RRP44.
 
     0.948
SKIV2L2
Superkiller viralicidic activity 2-like 2.
   
 0.886
HBS1L
HBS1-like protein; Belongs to the aldehyde dehydrogenase family.
   
 0.823
EXOSC8
Exosome complex component RRP43.
   
 0.821
C1D
Nuclear nucleic acid-binding protein C1D.
   
 
 0.792
UY3_05380
HBS1-like protein.
   
 0.777
UY3_02502
5'-3' exoribonuclease 1.
    
 0.750
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.