STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RFNGBeta-1,3-N-acetylglucosaminyltransferase radical fringe. (439 aa)    
Predicted Functional Partners:
UY3_08390
Neurogenic locus notch like protein 2.
    
 0.915
NOTCH1
Neurogenic locus notch like protein 1.
    
  0.904
NOTCH3
Epoxide hydrolase 4.
     
 0.902
UY3_12234
Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe.
     
 
0.900
UY3_14491
Negative elongation factor B.
   
 0.688
A4GALT
Lactosylceramide 4-alpha-galactosyltransferase.
      
 0.681
B3GALNT1
Hexosyltransferase.
    
 
 0.622
B3GLCT
Beta-1,3-glucosyltransferase.
      
 0.594
POLR2F
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
    
 0.529
UY3_13380
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.527
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.