STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYBTranscriptional activator Myb. (767 aa)    
Predicted Functional Partners:
UY3_13419
CREB-binding protein.
   
 
 0.933
UY3_00890
Uncharacterized protein.
   
 
 0.801
UY3_18467
Protein lin-9 like protein.
    
 0.744
SPI1
Transcription factor PU.1.
     
 0.734
UY3_13017
Protein lin-37 like protein.
   
 0.726
LIN52
Protein lin-52 like protein.
    
 0.725
TAL1
T-cell acute lymphocytic leukemia protein 1 like protein.
    
 0.678
UY3_07243
GATA-binding factor 2.
   
 0.660
FLI1
Friend leukemia integration 1 transcription factor.
     
 0.569
LIN54
Protein lin-54 like protein.
    
 0.553
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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