STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_02211U1 small nuclear ribonucleoprotein 70 kDa. (181 aa)    
Predicted Functional Partners:
UY3_15847
Small nuclear ribonucleoprotein Sm D2.
   
 0.971
SNRPG
Small nuclear ribonucleoprotein G.
   
 0.967
UY3_14609
Small nuclear ribonucleoprotein-associated protein N.
   
 0.950
ZMAT5
Zinc finger matrin-type protein 5.
   
 0.949
LSM10
U7 snRNA-associated Sm-like protein LSm10.
   
 0.949
RBM25
RNA-binding protein 25.
   
 
 0.921
LUC7L2
Putative RNA-binding protein Luc7-like 2.
   
 
 0.916
U2AF2
Splicing factor U2AF 65 kDa subunit.
   
 0.911
UY3_11864
Leucine-rich repeat-containing protein C10orf11 like protein.
   
 
 0.909
UY3_18093
U1 small nuclear ribonucleoprotein A.
   
 0.869
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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