STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRTP1Growth hormone-regulated TBC protein 1. (159 aa)    
Predicted Functional Partners:
UY3_10853
Growth hormone-regulated TBC protein 1.
 
      0.900
WDR90
WD repeat-containing protein 90.
    
  0.626
RAB9B
Ras-related protein Rab-9B.
    
 0.579
UY3_12021
Ras-related protein Rab-7b.
    
 0.530
UY3_00980
ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.
   
 0.523
UY3_10856
PCI domain-containing protein 2.
 
    
 0.514
CDC14A
Dual specificity protein phosphatase CDC14A.
    
 
 0.428
UY3_12902
Dual specificity protein phosphatase 23.
    
 
 0.428
UY3_09673
Dual specificity protein phosphatase CDC14A.
    
 
 0.428
UY3_03439
Dual specificity protein phosphatase CDC14B.
    
 
 0.428
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.