STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THUMPD2THUMP domain-containing protein 2. (407 aa)    
Predicted Functional Partners:
UY3_11682
Bifunctional aminoacyl-tRNA synthetase.
  
  
 0.632
ZBTB8OS
Protein archease.
      
 0.600
UY3_00848
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
     
 0.550
UY3_04161
Nogo-B receptor.
   
    0.522
HMGN2
Alkyl transferase; Belongs to the UPP synthase family.
   
    0.522
EXTL2
Exostosin-like 2.
      
 0.519
CMPK1
UMP-CMP kinase; Belongs to the adenylate kinase family.
      
 0.518
MLEC
Malectin.
      
 0.509
GCNT4
Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4.
      
 0.506
UY3_16847
Polyribonucleotide nucleotidyltransferase 1.
  
    0.503
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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