STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
P3H4Synaptonemal complex protein SC65. (205 aa)    
Predicted Functional Partners:
UY3_03869
Peptidyl-prolyl cis-trans isomerase B.
   
 0.777
P4HB
Protein disulfide-isomerase.
   
 
 0.739
UY3_16429
Prolyl 3-hydroxylase 3.
  
0.679
P3H1
Prolyl 3-hydroxylase 1.
   
0.650
P3H2
Prolyl 3-hydroxylase 2.
   
0.650
UY3_08079
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.649
SERPINH1
Serpin H1; Belongs to the serpin family.
   
 
 0.508
COL24A1
Collagen alpha-1(XXIV) chain.
    
 0.501
SLC26A2
Sulfate transporter.
      
 0.467
UY3_06497
CEP209_CC5 domain-containing protein.
      
 0.465
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.