STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSPNSarcospan. (255 aa)    
Predicted Functional Partners:
UY3_06398
Gamma-sarcoglycan.
   
 0.755
SGCD
Delta-sarcoglycan.
   
 0.690
UY3_15092
Dystroglycan.
     
 0.651
UY3_10050
Dystroglycan.
     
 0.651
UY3_14516
Epsilon-sarcoglycan.
   
 
 0.635
SGCA
Epsilon-sarcoglycan.
   
 
 0.635
UY3_17774
Beta-sarcoglycan.
     
 0.578
PALLD
Palladin.
   
  
 0.570
DYNLT3
Dynein light chain Tctex-type 3.
      
 0.540
DRP2
Dystrophin-related protein 2.
      
 0.493
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.