STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_00832E3 ubiquitin-protein ligase FANCL. (330 aa)    
Predicted Functional Partners:
UY3_13565
Fanconi anemia group M protein.
    
 0.996
UY3_17290
Fanconi anemia group B protein.
    
 0.989
UY3_14778
Fanconi anemia group F protein.
    
 0.989
UY3_00780
Fanconi anemia group A protein.
    
 0.989
FAAP24
Fanconi anemia-associated protein of 24 kDa.
    
 0.988
UY3_08874
Fanconi anemia group D2 protein.
    
 0.979
UY3_01833
Ubiquitin-conjugating enzyme E2 T; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.979
FANCI
Fanconi anemia group I protein.
    
 0.977
FAAP100
Uncharacterized protein.
    
 0.928
FANCC
Fanconi anemia group C protein like protein.
    
 0.927
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.