STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_02029Rab11 family-interacting protein 3. (355 aa)    
Predicted Functional Partners:
RAB11A
Ras-related protein Rab-11A.
    
 0.706
UY3_11542
Ras-related protein Rab-11A.
    
 0.706
RAB11B
Ras-related protein Rab-11B.
    
 0.706
RAB3IL1
Guanine nucleotide exchange factor for Rab-3A.
    
 0.671
RAB25
Ras-related protein Rab-25.
    
 0.668
RAB11FIP3
Rab11 family-interacting protein 3.
 
      0.639
GSC
Homeobox protein goosecoid.
    
   0.631
UY3_13648
Rab-like protein 2A.
    
 0.623
UY3_02032
Rab11 family-interacting protein 3.
 
      0.619
UY3_01437
Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1; Belongs to the glycosyltransferase 29 family.
    
 0.561
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.