STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARQ46265.1Phage tail tape-measure protein (Tape_meas_lam_C). (378 aa)    
Predicted Functional Partners:
ARQ46262.1
NlpC/P60 family protein.
 
     0.943
ARQ46259.1
Hypothetical protein.
 
     0.843
ARQ46263.1
Phage minor tail protein L.
       0.773
ARQ46264.1
Phage minor tail protein.
       0.773
ARQ46693.1
Hypothetical protein.
  
     0.687
ARQ46089.1
Phage portal protein, lambda family.
  
     0.686
ARQ46091.1
Phage terminase large subunit (GpA).
  
     0.681
ARQ46677.1
Phage head-tail joining protein.
  
     0.636
ARQ46683.1
Phage Terminase.
  
     0.624
ARQ46682.1
Phage portal protein.
  
     0.579
Your Current Organism:
Oxalobacter formigenes
NCBI taxonomy Id: 847
Other names: ATCC 35274, CIP 106513, O. formigenes, strain OxB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.