STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Y1Q_0011770Leucine-zipper-like transcriptional regulator 1. (386 aa)    
Predicted Functional Partners:
RHOBTB3
Rho-related BTB domain-containing protein 3.
   
 0.468
DRG1
Developmentally-regulated GTP-binding protein 1.
    
   0.465
NSF
Vesicle-fusing ATPase.
   
  0.436
VPS53
Vacuolar sorting-associated protein 53-like protein.
     
 0.433
VTI1A
Vesicle transport through interaction with t-SNAREs-like protein 1A.
   
 
  0.429
DDOST
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit isoform A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.415
CUNH15orf40
Uncharacterized protein.
    
   0.404
CS
Citrate synthase; Belongs to the citrate synthase family.
    
   0.404
CUNHXorf56
Uncharacterized protein.
    
   0.404
GRN-1
Granulins isoform B.
    
   0.404
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.