STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARHGAP29Rho GTPase-activating protein 29 isoform B. (1127 aa)    
Predicted Functional Partners:
CDC42
Cell division control 42-like protein.
   
 0.639
RND3
Rho-related GTP-binding protein RhoE.
    
 0.514
GRHL3
Grainyhead-like 3-like protein isoform A.
      
 0.511
PARG
Poly(ADP-ribose) glycohydrolase.
   
  
 0.483
RHOA
Transforming protein RhoA.
    
 0.459
RHOC
Rho-related GTP-binding protein RhoC.
    
 0.459
Y1Q_0007655
Uncharacterized protein.
    
 0.459
RHOB
Rho-related GTP-binding protein RhoB.
    
 0.459
RAC1
Ras-related C3 botulinum toxin substrate 1.
   
 0.455
RAC2
Uncharacterized protein.
   
 0.455
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.