STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIZ1Cip1-interacting zinc finger protein isoform B. (655 aa)    
Predicted Functional Partners:
ERH
Enhancer of rudimentary homolog; May have a role in the cell cycle.
    
 
 0.572
TBC1D21
TBC1 domain family member 21 isoform B.
      
 0.554
SLC30A10
Zinc transporter 10.
    
 0.547
ATF6B
Cyclic AMP-dependent transcription factor ATF-6 beta.
      
 0.541
NFATC1
Nuclear factor of activated T-cells, cytoplasmic 1 isoform B.
   
  
 0.486
E2F5
Transcription factor E2F5.
    
 
 0.460
FBN1
Uncharacterized protein.
   
 0.458
GAK-2
Uncharacterized protein.
    
  0.451
Y1Q_0001031
DUF3504 domain-containing protein.
      
 0.448
CEBPD
CCAAT/enhancer-binding protein delta.
    
 0.446
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.