RGS7 protein (Alligator mississippiensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

RGS7

Regulator of G-protein signaling 7 isoform B. (451 aa)

Predicted Functional Partners:

GNB4

0.756

GNB3

0.756

CCT5

0.754

PDE6G

0.671

WDR64

0.667

GRK2

0.618

GPR158

0.610

RGS9BP

0.589

GNAO1

0.583

GNAI3

0.583

Your Current Organism:

Alligator mississippiensis

NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCT5	GNB3	A0A151ND33	A0A151MCT7	T-complex protein 1 subunit epsilon.	WD_REPEATS_REGION domain-containing protein.	0.826
CCT5	GNB4	A0A151ND33	A0A151M6J3	T-complex protein 1 subunit epsilon.	Guanine nucleotide-binding protein subunit beta-4.	0.895
CCT5	RGS7	A0A151ND33	A0A151MH12	T-complex protein 1 subunit epsilon.	Regulator of G-protein signaling 7 isoform B.	0.754
CCT5	WDR64	A0A151ND33	A0A151MHF7	T-complex protein 1 subunit epsilon.	WD repeat-containing protein 64.	0.497
GNAI3	GNAO1	A0A151P6Y4	A0A151MSR7	Guanine nucleotide-binding protein G(K) subunit alpha.	Guanine nucleotide-binding protein G(O) subunit alpha.	0.901
GNAI3	GNB3	A0A151P6Y4	A0A151MCT7	Guanine nucleotide-binding protein G(K) subunit alpha.	WD_REPEATS_REGION domain-containing protein.	0.989
GNAI3	GNB4	A0A151P6Y4	A0A151M6J3	Guanine nucleotide-binding protein G(K) subunit alpha.	Guanine nucleotide-binding protein subunit beta-4.	0.992
GNAI3	PDE6G	A0A151P6Y4	A0A151NJX3	Guanine nucleotide-binding protein G(K) subunit alpha.	Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma.	0.732
GNAI3	RGS7	A0A151P6Y4	A0A151MH12	Guanine nucleotide-binding protein G(K) subunit alpha.	Regulator of G-protein signaling 7 isoform B.	0.583
GNAO1	GNAI3	A0A151MSR7	A0A151P6Y4	Guanine nucleotide-binding protein G(O) subunit alpha.	Guanine nucleotide-binding protein G(K) subunit alpha.	0.901
GNAO1	GNB3	A0A151MSR7	A0A151MCT7	Guanine nucleotide-binding protein G(O) subunit alpha.	WD_REPEATS_REGION domain-containing protein.	0.901
GNAO1	GNB4	A0A151MSR7	A0A151M6J3	Guanine nucleotide-binding protein G(O) subunit alpha.	Guanine nucleotide-binding protein subunit beta-4.	0.930
GNAO1	PDE6G	A0A151MSR7	A0A151NJX3	Guanine nucleotide-binding protein G(O) subunit alpha.	Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma.	0.732
GNAO1	RGS7	A0A151MSR7	A0A151MH12	Guanine nucleotide-binding protein G(O) subunit alpha.	Regulator of G-protein signaling 7 isoform B.	0.583
GNB3	CCT5	A0A151MCT7	A0A151ND33	WD_REPEATS_REGION domain-containing protein.	T-complex protein 1 subunit epsilon.	0.826
GNB3	GNAI3	A0A151MCT7	A0A151P6Y4	WD_REPEATS_REGION domain-containing protein.	Guanine nucleotide-binding protein G(K) subunit alpha.	0.989
GNB3	GNAO1	A0A151MCT7	A0A151MSR7	WD_REPEATS_REGION domain-containing protein.	Guanine nucleotide-binding protein G(O) subunit alpha.	0.901
GNB3	GNB4	A0A151MCT7	A0A151M6J3	WD_REPEATS_REGION domain-containing protein.	Guanine nucleotide-binding protein subunit beta-4.	0.904
GNB3	GPR158	A0A151MCT7	A0A151PCN3	WD_REPEATS_REGION domain-containing protein.	G_PROTEIN_RECEP_F3_4 domain-containing protein.	0.475
GNB3	GRK2	A0A151MCT7	A0A151MUC8	WD_REPEATS_REGION domain-containing protein.	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.	0.570