STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BOKBcl-2-related ovarian killer protein. (199 aa)    
Predicted Functional Partners:
BID
BH3-interacting domain death agonist.
   
 0.785
BCL2L11-1
Bcl-2-like protein 11 isoform C.
    
 0.751
MCL1
Induced myeloid leukemia cell differentiation protein Mcl-1.
    
 
 0.691
Y1Q_0019264
Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
    
 0.687
APAF1
Apoptotic protease-activating factor 1.
    
 
 0.642
BECN1
Beclin-1.
    
 
 0.636
BNIP3
BCL2/adenovirus E1B protein-interacting protein 3.
    
 
 0.583
CASP9
Caspase-9; Belongs to the peptidase C14A family.
    
 0.578
CASP18
Initiator caspase; Belongs to the peptidase C14A family.
    
 0.577
BMF
Bcl-2-modifying factor.
    
 0.559
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.