STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRAS1LExtracellular matrix protein FRAS1 isoform B. (3468 aa)    
Predicted Functional Partners:
FRAS1
Extracellular matrix protein FRAS1 isoform A.
 
 
 
0.923
ITGAV
Integrin alpha-V; Belongs to the integrin alpha chain family.
   
 
 0.905
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
    
  0.901
PTPRM
Receptor-type tyrosine-protein phosphatase mu isoform C.
   
 
 0.714
EDN3
Endothelin-3.
      
 0.681
GRHL3
Grainyhead-like 3-like protein isoform A.
   
  
 0.680
Y1Q_0000589
LRRNT domain-containing protein.
   
 0.659
RXFP1
Relaxin receptor 1 isoform A.
   
 0.659
Y1Q_0015620
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
 0.659
RXFP1-2
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
 0.659
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.