STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Y1Q_0020533CNH domain-containing protein. (688 aa)    
Predicted Functional Partners:
STK26
Serine/threonine-protein kinase 26.
 
  
 
 0.905
TAOK1
Serine/threonine-protein kinase TAO1; Belongs to the protein kinase superfamily.
 
 
   0.902
STK25
Serine/threonine-protein kinase 25.
 
  
   0.901
STK24
Protein kinase domain-containing protein.
 
  
   0.901
Y1Q_0015488
Protein kinase domain-containing protein.
 
      0.900
STK4-2
Protein kinase domain-containing protein.
 
 
    0.899
STK4
Serine/threonine-protein kinase 4.
 
 
    0.896
Y1Q_0011528
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
 
   
  0.886
PAK3
Non-specific serine/threonine protein kinase.
 
 
    0.760
PAK2
Non-specific serine/threonine protein kinase.
 
 
    0.759
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.