STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRC1Leucine-rich repeat-containing protein 1 isoform G. (1689 aa)    
Predicted Functional Partners:
ADGRL1
Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.
    
 
 0.727
CEBPZ
CCAAT/enhancer-binding protein zeta.
      
 0.708
ADGRL2
Adhesion G protein-coupled receptor L2 isoform E; Belongs to the G-protein coupled receptor 2 family.
    
 
 0.708
Y1Q_0002127
SUEL-type lectin domain-containing protein.
    
 
 0.697
ADGRL3
Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.
    
 
 0.697
PRDX3-1
Thioredoxin-dependent peroxide reductase, mitochondrial isoform A.
      
 0.519
PPP1CA-2
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 0.518
PPP1CC
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 0.518
PPP1CA
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 0.518
PHLPP1
PPM-type phosphatase domain-containing protein.
    
0.494
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.