STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Y1Q_0018849Uncharacterized protein. (425 aa)    
Predicted Functional Partners:
RIMS2-2
Regulating synaptic membrane exocytosis protein 2-like.
    
 0.993
RIMS2A
Regulating synaptic membrane exocytosis protein 2 isoform C.
    
 0.993
CASK
Peripheral plasma membrane protein CASK isoform B; Belongs to the MAGUK family.
   
 
 0.639
BZRAP1
Peripheral-type benzodiazepine receptor-associated protein 1 isoform B.
   
 0.551
RIMBP2
RIMS-binding protein 2 isoform C.
   
 0.551
RIMS2
Regulating synaptic membrane exocytosis protein 2 isoform A.
    
 0.536
Y1Q_0013981
Uncharacterized protein.
    
 0.536
RIMS3
Regulating synaptic membrane exocytosis protein 3.
    
 0.536
RIMS4
Regulating synaptic membrane exocytosis protein 4.
    
 0.518
STXBP3
Syntaxin-binding protein 3; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.449
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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