STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARMC12Armadillo repeat-containing protein 12. (329 aa)    
Predicted Functional Partners:
ARMC1
Armadillo repeat-containing protein 1.
      
 0.746
VDAC3
Voltage-dependent anion-selective channel protein 3.
      
 0.680
AKAP1
A-kinase anchor protein 1, mitochondrial.
      
 0.668
ZPBP-1
Zona pellucida-binding protein 1 isoform C.
      
 0.667
OCIAD1
OCIA domain-containing protein 1.
      
 0.666
RBBP4-2
WD_REPEATS_REGION domain-containing protein.
    
 
 0.598
RBBP4
Histone-binding protein RBBP4.
    
 
 0.595
VDAC2
Voltage-dependent anion-selective channel protein 2.
      
 0.588
DNM1L
Dynamin-1-like protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
      
 0.588
KLHL40-2
BTB domain-containing protein.
      
 0.585
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
Server load: low (20%) [HD]