STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALX3-1Homeobox protein aristaless-like 3 isoform B. (203 aa)    
Predicted Functional Partners:
LHX3
LIM/homeobox protein Lhx3.
   
0.753
LHX4
LIM/homeobox protein Lhx4.
   
0.753
Y1Q_0006664
Uncharacterized protein.
    
 0.631
Y1Q_0011037
LID domain-containing protein.
    
 0.631
LDB1
LIM domain-binding protein 1 isoform C.
    
 0.631
MKX
Homeobox protein Mohawk.
   
 
 0.513
ASCL1
Achaete-scute-like protein 1.
   
 0.502
PIK3C2G-2
Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit gamma; Belongs to the PI3/PI4-kinase family.
    
 
 0.496
PIK3C2B
Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit beta isoform B; Belongs to the PI3/PI4-kinase family.
    
 
 0.474
KCNJ11-2
Uncharacterized protein.
      
 0.472
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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