STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Y1Q_0009306Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (141 aa)    
Predicted Functional Partners:
KIFAP3
Kinesin-associated protein 3.
   
 0.754
BAP1
Ubiquitin carboxyl-terminal hydrolase.
    
 0.491
UCHL5
Ubiquitin carboxyl-terminal hydrolase.
    
 0.491
ZW10
Centromere/kinetochore zw10-like protein.
     
 0.460
KIF11
Kinesin-like protein KIF11 isoform B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.452
IFT80
Intraflagellar transport 80-like protein.
    
 0.424
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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