STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCB7ATP-binding cassette sub-family B member 7, mitochondrial. (724 aa)    
Predicted Functional Partners:
Y1Q_0019109
Multidrug resistance protein 1-like.
 
  
 0.812
ABCE1
ATP-binding cassette sub-family E member 1.
      
 0.753
ABCF2
ATP-binding cassette sub-family F member 2.
      
 0.736
ABCB8
ATP-binding cassette sub-family B member 8, mitochondrial.
    
0.730
FECH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
   
 
 0.720
ABCB10
ATP-binding cassette sub-family B member 10, mitochondrial isoform A.
    
0.712
NFS1
Cysteine desulfurase, mitochondrial.
    
 
 0.702
FXN
Frataxin, mitochondrial.
      
 0.701
CIAPIN1
Anamorsin; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis, facilitating the de novo assembly of a [4Fe-4S] cluster on the scaffold complex NUBP1-NUBP2. Electrons are transferred to CIAPIN1 from NADPH via the FAD- and FMN-containing protein NDOR1. NDOR1-CIAPIN1 are also required for the assembly of the diferric tyrosyl radical cofactor of ribonucleotide reductase (RNR), probably by providing electron [...]
      
 0.701
ISCA1
Iron-sulfur cluster assembly 1-like protein, mitochondrial.
      
 0.700
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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