STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM185AProtein FAM185A isoform B. (337 aa)    
Predicted Functional Partners:
PEX13
Peroxisome biogenesis factor 13.
   
 0.958
PEX19-1
Peroxisomal biogenesis factor 19 isoform B.
    
 0.952
SCP2
Non-specific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family.
    
 0.948
Y1Q_0008065
Enoyl-CoA delta isomerase 2, mitochondrial-like.
    
 0.942
ECI2
Enoyl-CoA delta isomerase 2, mitochondrial.
    
 0.942
HSDL2
Hydroxysteroid dehydrogenase-like protein 2.
    
 0.940
EPHX2
Bifunctional epoxide hydrolase 2.
   
 
  0.933
ZFAND4
AN1-type zinc finger protein 4 isoform A.
    
 0.931
PEX7
Peroxisomal biogenesis factor 7.
    
 0.927
PEX5L
PEX5-related protein isoform C.
   
 0.906
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.