STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMED2Transmembrane emp24 domain-containing protein 2 isoform B. (201 aa)    
Predicted Functional Partners:
TMED10
Transmembrane emp24 domain-containing protein 10.
   
0.999
TMED9
Transmembrane emp24 domain-containing protein 9.
   
0.962
TMED11
Transmembrane emp24 domain-containing protein 11.
   
0.962
TMED7
Transmembrane emp24 domain-containing protein 7.
   
0.905
Y1Q_0013276
GOLD domain-containing protein.
   
 0.905
PLIN3
Perilipin-3.
   
 0.904
SEC13
SEC13-like protein; Belongs to the WD repeat SEC13 family.
    
 0.851
LMAN1
Protein ERGIC-53.
   
 0.830
SURF4
Surfeit locus protein 4.
   
 0.828
Y1Q_0009018
Surfeit locus protein 4-like.
   
 0.811
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.