STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM214LTransmembrane protein 214. (228 aa)    
Predicted Functional Partners:
TMEM214
Transmembrane protein 214.
 
     0.924
SEC63
Translocation SEC63-like protein.
   
 
 0.583
TMEM70
Transmembrane protein 70, mitochondrial.
      
 0.448
SEC61A1-2
Plug_translocon domain-containing protein.
   
  
 0.430
RHBDD1
Rhomboid-related protein 4.
      
 0.416
WFS1
Wolframin.
      
 0.410
CKAP4
Cytoskeleton-associated protein 4.
    
 
 0.407
TRMT11
tRNA (Guanine(10)-N2)-methyltransferase-like protein.
      
 0.406
MOGS
Mannosyl-oligosaccharide glucosidase.
   
  
 0.406
EXD2
Exonuclease 3'-5' domain-containing protein 2 isoform A.
      
 0.403
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.